Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928153.1_cds_XP_016475811.1_67707
CDS Infomation

[gene=LOC107797425] [db_xref=GeneID:107797425] [protein=endoglucanase 24-like] [protein_id=XP_016475811.1] [location=complement(join(31453..32061,32188..32349,32944..33243,35783..36196))] [gbkey=CDS]
Sequence

ATGAAGAACAACATTTCTTCAAAATTCATGTTTCTTCTCCTTTTACTTGCAGTTGAAAAA
ATCCATGGAAGCTACCACGACTACACAGACGCATTAACAAAATCCATTCTCTTTTTCGAA
GGCCAACGTTCTGGTTATTTACCACAAGACCAGAGAATGAACTGGCGAGGACATTCCGGT
TTAGGCGACGGGTGGACAGTGAATACAGATTTGACCGGCGGTTACTACGACGCCGGCGAT
AATGTGAAGTTTAATTTTCCGATGGCATTTACCACTACATTGTTGGCTTGGAGTGTGATT
GAGTTTGGGGAGTATATGCAACCCTCTGAGTTAAGGAATGCATTAGTCGCTATCCGTTGG
TCCACTGATTATCTTCTCAAGACAGTCTCTCAACCCAATCGCATTTTTGTCCAGGTGGGA
GATCCAGTCCTAGACCATAACTGCTGGGAAAGGCCAGAAGATATGGATACTGCTAGGACA
GTATATACAGTGGATGCTCCGAATCCGGCATCCGACGTGGCCGGAGAGACTGCAGCTGCG
TTCGCAGCTGCATCCATTGCTTTCCGGTCATCGGATCCCGGATATTCCGACACACTTTTG
AGAACATCCACTAGGGTGTTTGATTTTGCAGATAGGAACCGTGGAGCTTACAGTGACAAT
GTCAATATTAGAGATGGAGTTTGTCCGTATTATTGTGATTTTGATGGATATCAGGATGAG
TTGTTGTGGGGAGCAGCGTGGCTTAGGAGGGCTACACAGAGTGACACTTACATGAATTAC
ATACAAGAGAATCGCCAAACACTTGGGGCCGATGACAACATCAATGAATTTGGATGGGAC
AATAAGCACGCTGGTCTTAATGTTCTTGTTTCTAAGGAAGTCTTAGAAGGGAGCGTGTAT
TCGCTTCAATCTTACAAAGCATCAGCAGATAGTTTCATGTGCACATTGATCCCAGAATCA
TCATCTTCACATATAGAATACTCTCCCGGTGGCCTAATTTACAAACCAGGAGGAAGCAAT
TTACAACATGCTACAACCATCACATTTTTACTCCTCATCTACGCAAATTACTTAGAAAAA
TCATCACAAGTCTTGAATTGTGGCACTATTAGTGTCAATCCATCGATGCTTCGAAAAATT
GGTAAGAGACAAGTTGATTACATTTTGGGAGATAATCCTAAAGGAATGTCTTACATGGTT
GGTTATAGTAATTACTATCCTTCAAAAATTCATCACCGTGGCTCGTCCCTTCCATCGATT
AAAGATCATCCTCAGTTCATCGCGTGCAGAGAGGGTTCGATTTATTTTAACTCATCGCAG
CCAAATCCTAATGTTTTAGTTGGTGCAATTGTTGGTGGACCTGGAGAAGATGATGTTTAT
GATGATAGTAGGGTTGATTTTCGCAAGTCCGAGCCAACTACTTATATTAATGCACCATTT
GTAGGTGCACTTGCTTATTTTGCTGCTAATCCTAACATTAGTTAA

Peptide Sequence

PEP ID

XP_016475811.1
PEP Infomation

PREDICTED: endoglucanase 24-like [Nicotiana tabacum]
Sequence

MKNNISSKFMFLLLLLAVEKIHGSYHDYTDALTKSILFFEGQRSGYLPQDQRMNWRGHSG
LGDGWTVNTDLTGGYYDAGDNVKFNFPMAFTTTLLAWSVIEFGEYMQPSELRNALVAIRW
STDYLLKTVSQPNRIFVQVGDPVLDHNCWERPEDMDTARTVYTVDAPNPASDVAGETAAA
FAAASIAFRSSDPGYSDTLLRTSTRVFDFADRNRGAYSDNVNIRDGVCPYYCDFDGYQDE
LLWGAAWLRRATQSDTYMNYIQENRQTLGADDNINEFGWDNKHAGLNVLVSKEVLEGSVY
SLQSYKASADSFMCTLIPESSSSHIEYSPGGLIYKPGGSNLQHATTITFLLLIYANYLEK
SSQVLNCGTISVNPSMLRKIGKRQVDYILGDNPKGMSYMVGYSNYYPSKIHHRGSSLPSI
KDHPQFIACREGSIYFNSSQPNPNVLVGAIVGGPGEDDVYDDSRVDFRKSEPTTYINAPF
VGALAYFAANPNIS

Transcript Sequence

Gene sequence data has not been registered.